| GLI3 | P10071 | NPHP3-AS1-202 | ENST00000504440 | 2507 nt | TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ADAM21-201 | ENST00000603540 | 2658 nt | APPRIS P1 TSL 3 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | IGFN1-202 | ENST00000335211 | 11810 nt | APPRIS P2 TSL 5 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | STK32A-202 | ENST00000397936 | 5393 nt | APPRIS P1 TSL 5 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | PREPL-201 | ENST00000260648 | 3672 nt | APPRIS P1 TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | RGS4-203 | ENST00000367909 | 3200 nt | APPRIS P1 TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AMD1-203 | ENST00000368882 | 3059 nt | TSL 2 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LY6G5C-210 | ENST00000383237 | 674 nt | APPRIS P2 TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | C6orf48-208 | ENST00000395788 | 815 nt | APPRIS P1 TSL 2 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | OR6D1P-201 | ENST00000436165 | 939 nt | BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC068189.1-201 | ENST00000501164 | 2632 nt | TSL 2 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC093909.2-201 | ENST00000505178 | 437 nt | TSL 3 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | RAB9BP1-201 | ENST00000519581 | 626 nt | BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AP003028.1-203 | ENST00000525832 | 444 nt | TSL 3 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AL133406.3-201 | ENST00000606817 | 541 nt | BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | MOSPD2-201 | ENST00000380492 | 4163 nt | APPRIS P1 TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CD200R1-201 | ENST00000295863 | 1692 nt | TSL 2 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CLASP1-215 | ENST00000541377 | 7909 nt | TSL 5 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | TSC1-203 | ENST00000440111 | 8463 nt | APPRIS P1 TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | GABRR1-203 | ENST00000454853 | 2820 nt | APPRIS P1 TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | UGT2A1-206 | ENST00000514019 | 2376 nt | TSL 2 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ITCH-201 | ENST00000262650 | 3089 nt | TSL 1 (best) BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LRRC36-202 | ENST00000435835 | 1765 nt | TSL 2 BASIC | 7.57 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LIN7A-204 | ENST00000552864 | 6112 nt | APPRIS P1 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | NDST4-204 | ENST00000613194 | 3439 nt | TSL 5 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ST6GAL1-211 | ENST00000448044 | 4302 nt | APPRIS P1 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ZNF549-204 | ENST00000602149 | 5505 nt | TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | DEFB113-201 | ENST00000398718 | 249 nt | APPRIS P1 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AL353626.3-201 | ENST00000413399 | 657 nt | BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC011742.2-201 | ENST00000443818 | 352 nt | BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | C10orf128-207 | ENST00000474718 | 614 nt | APPRIS P3 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC018709.1-201 | ENST00000509111 | 700 nt | APPRIS P1 TSL 3 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC122710.1-201 | ENST00000510622 | 553 nt | TSL 5 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC004890.3-201 | ENST00000605566 | 1095 nt | BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC073869.10-201 | ENST00000642016 | 354 nt | BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | RGPD2-203 | ENST00000638730 | 5306 nt | APPRIS ALT2 TSL 5 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CCR2-201 | ENST00000292301 | 2671 nt | TSL 5 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | VWA3A-202 | ENST00000389398 | 4600 nt | APPRIS P2 TSL 5 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | FNIP1-202 | ENST00000307968 | 6388 nt | APPRIS ALT2 TSL 5 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CACNB4-239 | ENST00000636947 | 5575 nt | TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | FANCD2-205 | ENST00000431693 | 2450 nt | TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ZNF733P-202 | ENST00000444809 | 1573 nt | BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LINC01504-201 | ENST00000436054 | 2078 nt | TSL 2 BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | PLEKHH2-201 | ENST00000282406 | 6981 nt | APPRIS P1 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | PAQR5-201 | ENST00000340965 | 4943 nt | APPRIS P1 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ATF7IP2-204 | ENST00000396560 | 3665 nt | APPRIS P1 TSL 1 (best) BASIC | 7.56 | □□□□□ -1.2 | | |
| GLI3 | P10071 | TNC-202 | ENST00000350763 | 7641 nt | APPRIS P2 TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | SHC4-202 | ENST00000396535 | 2799 nt | TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | SEC31A-226 | ENST00000508479 | 3397 nt | TSL 2 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | NRCAM-204 | ENST00000379028 | 6685 nt | APPRIS ALT2 TSL 5 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | OR2J2-202 | ENST00000377167 | 1272 nt | APPRIS P1 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AL139008.2-201 | ENST00000420315 | 395 nt | TSL 3 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | C4BPAP2-201 | ENST00000428434 | 478 nt | BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC016712.1-201 | ENST00000431088 | 378 nt | BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC020937.1-201 | ENST00000519677 | 1013 nt | BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC007494.1-201 | ENST00000562293 | 760 nt | BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CLEC2D-203 | ENST00000290855 | 5279 nt | APPRIS P3 TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | UBE4B-202 | ENST00000343090 | 5267 nt | TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | FBXL17-203 | ENST00000496714 | 3773 nt | TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ADA2-210 | ENST00000610390 | 4137 nt | TSL 5 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | OR4K13-203 | ENST00000641904 | 5684 nt | APPRIS P1 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | PGAP1-201 | ENST00000354764 | 11114 nt | APPRIS P1 TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | NDUFS1-207 | ENST00000455934 | 3361 nt | TSL 2 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ZNF83-203 | ENST00000541777 | 3743 nt | APPRIS P1 TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | KCNA2-214 | ENST00000640774 | 6673 nt | TSL 5 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | UNC79-206 | ENST00000621021 | 7377 nt | APPRIS P2 TSL 5 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | MIA3-201 | ENST00000340535 | 2735 nt | TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CLEC6A-201 | ENST00000382073 | 1682 nt | APPRIS P1 TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | PKD1L1-201 | ENST00000289672 | 9092 nt | APPRIS P1 TSL 1 (best) BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | GOLGA6L6-201 | ENST00000619213 | 4013 nt | APPRIS P1 TSL 5 BASIC | 7.55 | □□□□□ -1.2 | | |
| GLI3 | P10071 | PDE4DIP-205 | ENST00000369354 | 8262 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LINC02532-206 | ENST00000433965 | 570 nt | TSL 2 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | NDUFAF4P2-201 | ENST00000445374 | 520 nt | BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AL162739.1-201 | ENST00000450606 | 307 nt | BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LINC02218-201 | ENST00000503267 | 529 nt | TSL 2 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC025366.1-201 | ENST00000523264 | 202 nt | TSL 3 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC090109.1-201 | ENST00000548885 | 819 nt | TSL 3 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LINC02563-201 | ENST00000579474 | 277 nt | TSL 3 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | MIR3934-201 | ENST00000579806 | 107 nt | BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC005757.1-201 | ENST00000591432 | 472 nt | TSL 4 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | RDM1-215 | ENST00000612980 | 501 nt | TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | WWOX-217 | ENST00000620008 | 450 nt | TSL 2 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC087632.1-216 | ENST00000625619 | 487 nt | APPRIS P1 TSL 3 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | MAPK10-350 | ENST00000641777 | 965 nt | BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | MAGT1-201 | ENST00000358075 | 4047 nt | APPRIS P2 TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | LINC00861-201 | ENST00000500989 | 5330 nt | TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | TSPAN6-204 | ENST00000612152 | 3796 nt | TSL 5 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ATM-215 | ENST00000530958 | 5718 nt | TSL 2 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | FAM13C-219 | ENST00000621119 | 3400 nt | APPRIS ALT2 TSL 5 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | OR2T5-201 | ENST00000641363 | 2525 nt | APPRIS P1 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | EPS15P1-202 | ENST00000459691 | 2071 nt | BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AC093010.2-202 | ENST00000493033 | 3023 nt | TSL 2 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | DNAH10-201 | ENST00000409039 | 14473 nt | APPRIS ALT2 TSL 5 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | MAPK10-206 | ENST00000395161 | 4186 nt | TSL 5 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | AK9-201 | ENST00000285397 | 2566 nt | TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ZNF484-202 | ENST00000375495 | 2867 nt | APPRIS P3 TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CSMD1-206 | ENST00000520002 | 11740 nt | APPRIS ALT2 TSL 5 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | CSMD1-216 | ENST00000602557 | 11740 nt | APPRIS ALT2 TSL 5 BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | ZNF37A-201 | ENST00000351773 | 7027 nt | APPRIS P1 TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |
| GLI3 | P10071 | RPGRIP1L-202 | ENST00000379925 | 5297 nt | TSL 1 (best) BASIC | 7.54 | □□□□□ -1.2 | | |