Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-1334P-201ENST00000516032 105 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 SNORA74.1-201ENST00000516320 180 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 TRIM51DP-201ENST00000529746 596 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 CYB5AP5-201ENST00000549779 389 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC002310.3-201ENST00000569728 723 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC080013.4-201ENST00000607624 649 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC005021.1-201ENST00000608730 355 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC015540.1-201ENST00000615828 501 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AL035461.2-201ENST00000619201 524 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 OR7A1P-202ENST00000641542 1158 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC034111.1-201ENST00000562143 3770 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 RNU6-252P-201ENST00000363232 107 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AF274854.1-201ENST00000413236 615 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 OR5M12P-201ENST00000423388 929 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 MTCYBP5-201ENST00000423752 1135 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC005345.1-201ENST00000431868 217 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 GTF2IP14-201ENST00000441415 586 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 CBX1-205ENST00000495350 550 ntTSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 UGT2B24P-201ENST00000514441 1597 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC092718.4-201ENST00000566639 716 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 CBX3P2-202ENST00000583365 535 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 SMIM12P1-201ENST00000603004 274 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 Z82195.1-201ENST00000604558 398 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AL359715.4-201ENST00000606629 1436 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AL135999.3-201ENST00000610501 812 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 MIR6862-1-201ENST00000613016 70 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 MIR6862-2-201ENST00000614755 70 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 AC139426.3-201ENST00000605648 2059 ntBASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.01□□□□□ -0.97
CSB-PGBD3P0DP91 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 FO082842.1-201ENST00000423552 1370 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC005522.1-201ENST00000395416 346 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC016831.2-201ENST00000417179 352 ntBASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms