RNA–Protein interactions for RNA: ENST00000416664.1

GPC5-IT1-201, GPC5 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene GPC5-IT1, Length 658 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-IT1-201ENST00000416664 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
GPC5-IT1-201ENST00000416664 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
GPC5-IT1-201ENST00000416664 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
GPC5-IT1-201ENST00000416664 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
GPC5-IT1-201ENST00000416664 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
GPC5-IT1-201ENST00000416664 FOXD1Q16676 465 aa20.3■□□□□ 0.84
GPC5-IT1-201ENST00000416664 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
GPC5-IT1-201ENST00000416664 ADRA2BP18089 450 aa19.53■□□□□ 0.72
GPC5-IT1-201ENST00000416664 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
GPC5-IT1-201ENST00000416664 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
GPC5-IT1-201ENST00000416664 MSH5O43196 834 aa18.63■□□□□ 0.57
GPC5-IT1-201ENST00000416664 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
GPC5-IT1-201ENST00000416664 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
GPC5-IT1-201ENST00000416664 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
GPC5-IT1-201ENST00000416664 KCNA4P22459 653 aa17.63■□□□□ 0.41
GPC5-IT1-201ENST00000416664 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
GPC5-IT1-201ENST00000416664 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
GPC5-IT1-201ENST00000416664 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
GPC5-IT1-201ENST00000416664 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
GPC5-IT1-201ENST00000416664 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
GPC5-IT1-201ENST00000416664 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
GPC5-IT1-201ENST00000416664 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
GPC5-IT1-201ENST00000416664 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
GPC5-IT1-201ENST00000416664 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
GPC5-IT1-201ENST00000416664 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
GPC5-IT1-201ENST00000416664 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
GPC5-IT1-201ENST00000416664 ZBTB22O15209 634 aa16.27■□□□□ 0.2
GPC5-IT1-201ENST00000416664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
GPC5-IT1-201ENST00000416664 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
GPC5-IT1-201ENST00000416664 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
GPC5-IT1-201ENST00000416664 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
GPC5-IT1-201ENST00000416664 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
GPC5-IT1-201ENST00000416664 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
GPC5-IT1-201ENST00000416664 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
GPC5-IT1-201ENST00000416664 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
GPC5-IT1-201ENST00000416664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
GPC5-IT1-201ENST00000416664 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
GPC5-IT1-201ENST00000416664 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
GPC5-IT1-201ENST00000416664 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
GPC5-IT1-201ENST00000416664 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
GPC5-IT1-201ENST00000416664 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
GPC5-IT1-201ENST00000416664 APLP2Q06481 763 aa15.53■□□□□ 0.08
GPC5-IT1-201ENST00000416664 CAPN15O75808 1086 aa15.46■□□□□ 0.07
GPC5-IT1-201ENST00000416664 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
GPC5-IT1-201ENST00000416664 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
GPC5-IT1-201ENST00000416664 DSG3P32926 999 aa15.26■□□□□ 0.03
GPC5-IT1-201ENST00000416664 ABCB7O75027 752 aa15.2■□□□□ 0.02
GPC5-IT1-201ENST00000416664 POLA2Q14181 598 aa15.17■□□□□ 0.02
GPC5-IT1-201ENST00000416664 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
GPC5-IT1-201ENST00000416664 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
GPC5-IT1-201ENST00000416664 FBLN2P98095 1184 aa14.81□□□□□ -0.04
GPC5-IT1-201ENST00000416664 POTEHQ6S545 545 aa14.67□□□□□ -0.06
GPC5-IT1-201ENST00000416664 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
GPC5-IT1-201ENST00000416664 FKBP8Q14318 412 aa14.55□□□□□ -0.08
GPC5-IT1-201ENST00000416664 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
GPC5-IT1-201ENST00000416664 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
GPC5-IT1-201ENST00000416664 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
GPC5-IT1-201ENST00000416664 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
GPC5-IT1-201ENST00000416664 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
GPC5-IT1-201ENST00000416664 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
GPC5-IT1-201ENST00000416664 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
GPC5-IT1-201ENST00000416664 PROM2Q8N271 834 aa14.34□□□□□ -0.11
GPC5-IT1-201ENST00000416664 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
GPC5-IT1-201ENST00000416664 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
GPC5-IT1-201ENST00000416664 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
GPC5-IT1-201ENST00000416664 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
GPC5-IT1-201ENST00000416664 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
GPC5-IT1-201ENST00000416664 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
GPC5-IT1-201ENST00000416664 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
GPC5-IT1-201ENST00000416664 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
GPC5-IT1-201ENST00000416664 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
GPC5-IT1-201ENST00000416664 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
GPC5-IT1-201ENST00000416664 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
GPC5-IT1-201ENST00000416664 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
GPC5-IT1-201ENST00000416664 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
GPC5-IT1-201ENST00000416664 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
GPC5-IT1-201ENST00000416664 MIER1Q8N108 512 aa13.73□□□□□ -0.21
GPC5-IT1-201ENST00000416664 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
GPC5-IT1-201ENST00000416664 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
GPC5-IT1-201ENST00000416664 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
GPC5-IT1-201ENST00000416664 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
GPC5-IT1-201ENST00000416664 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
GPC5-IT1-201ENST00000416664 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
GPC5-IT1-201ENST00000416664 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
GPC5-IT1-201ENST00000416664 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
GPC5-IT1-201ENST00000416664 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
GPC5-IT1-201ENST00000416664 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
GPC5-IT1-201ENST00000416664 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
GPC5-IT1-201ENST00000416664 NUBP1P53384 320 aa13.45□□□□□ -0.26
GPC5-IT1-201ENST00000416664 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
GPC5-IT1-201ENST00000416664 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
GPC5-IT1-201ENST00000416664 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
GPC5-IT1-201ENST00000416664 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
GPC5-IT1-201ENST00000416664 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
GPC5-IT1-201ENST00000416664 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
GPC5-IT1-201ENST00000416664 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
GPC5-IT1-201ENST00000416664 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
GPC5-IT1-201ENST00000416664 HAX1O00165 279 aa13.25□□□□□ -0.29
GPC5-IT1-201ENST00000416664 EVX2Q03828 476 aa13.25□□□□□ -0.29
GPC5-IT1-201ENST00000416664 PKD2Q13563 968 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms