Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.2□□□□□ -1.42
RETP07949 SPTLC1P2-201ENST00000407089 121 ntBASIC6.2□□□□□ -1.42
RETP07949 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.2□□□□□ -1.42
RETP07949 PCBP2P1-201ENST00000437262 977 ntBASIC6.2□□□□□ -1.42
RETP07949 GAPDHP58-201ENST00000438477 1006 ntBASIC6.2□□□□□ -1.42
RETP07949 AL512637.1-201ENST00000439523 1231 ntBASIC6.2□□□□□ -1.42
RETP07949 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.2□□□□□ -1.42
RETP07949 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.2□□□□□ -1.42
RETP07949 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.2□□□□□ -1.42
RETP07949 CYCSP22-201ENST00000517555 339 ntBASIC6.2□□□□□ -1.42
RETP07949 AC073916.1-201ENST00000545095 130 ntBASIC6.2□□□□□ -1.42
RETP07949 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.2□□□□□ -1.42
RETP07949 AC010547.6-201ENST00000571789 193 ntBASIC6.2□□□□□ -1.42
RETP07949 AC090616.1-201ENST00000583895 447 ntBASIC6.2□□□□□ -1.42
RETP07949 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.2□□□□□ -1.42
RETP07949 AL138960.1-201ENST00000613838 513 ntBASIC6.2□□□□□ -1.42
RETP07949 AC010998.3-201ENST00000613871 631 ntBASIC6.2□□□□□ -1.42
RETP07949 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.2□□□□□ -1.42
RETP07949 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.2□□□□□ -1.42
RETP07949 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.2□□□□□ -1.42
RETP07949 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.2□□□□□ -1.42
RETP07949 AC116667.2-201ENST00000641075 823 ntBASIC6.2□□□□□ -1.42
RETP07949 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RETP07949 LINC01616-201ENST00000561816 2280 ntBASIC6.2□□□□□ -1.42
RETP07949 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 CR383656.5-201ENST00000547616 1340 ntBASIC6.2□□□□□ -1.42
RETP07949 WDR95P-201ENST00000425638 1542 ntBASIC6.2□□□□□ -1.42
RETP07949 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.19□□□□□ -1.42
RETP07949 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.19□□□□□ -1.42
RETP07949 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RETP07949 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.19□□□□□ -1.42
RETP07949 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.19□□□□□ -1.42
RETP07949 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RETP07949 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RETP07949 RNU1-150P-201ENST00000362491 162 ntBASIC6.19□□□□□ -1.42
RETP07949 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RETP07949 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RETP07949 AL132875.1-201ENST00000403623 949 ntBASIC6.19□□□□□ -1.42
RETP07949 RNA5SP156-201ENST00000410250 110 ntBASIC6.19□□□□□ -1.42
RETP07949 RNU4-34P-201ENST00000410431 124 ntBASIC6.19□□□□□ -1.42
RETP07949 NPM1P22-201ENST00000427761 952 ntBASIC6.19□□□□□ -1.42
RETP07949 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 AL512605.1-202ENST00000441919 381 ntBASIC6.19□□□□□ -1.42
RETP07949 AL359955.2-201ENST00000445380 353 ntBASIC6.19□□□□□ -1.42
RETP07949 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.19□□□□□ -1.42
RETP07949 AC231760.1-201ENST00000498002 260 ntBASIC6.19□□□□□ -1.42
RETP07949 NPM1P27-201ENST00000502784 830 ntBASIC6.19□□□□□ -1.42
RETP07949 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RETP07949 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.19□□□□□ -1.42
RETP07949 WBP1LP3-201ENST00000523033 208 ntBASIC6.19□□□□□ -1.42
RETP07949 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 AL390726.5-202ENST00000564800 256 ntBASIC6.19□□□□□ -1.42
RETP07949 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.19□□□□□ -1.42
RETP07949 AC024589.2-201ENST00000605642 1294 ntBASIC6.19□□□□□ -1.42
RETP07949 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.19□□□□□ -1.42
RETP07949 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.19□□□□□ -1.42
RETP07949 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.19□□□□□ -1.42
RETP07949 AC105235.1-201ENST00000623208 1816 ntBASIC6.19□□□□□ -1.42
RETP07949 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RETP07949 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.19□□□□□ -1.42
RETP07949 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RETP07949 RBMY1HP-201ENST00000382759 1389 ntBASIC6.18□□□□□ -1.42
RETP07949 NEPNP-201ENST00000404786 1371 ntBASIC6.18□□□□□ -1.42
RETP07949 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.18□□□□□ -1.42
RETP07949 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RETP07949 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RETP07949 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RETP07949 GAPDHP24-201ENST00000328713 983 ntBASIC6.18□□□□□ -1.42
RETP07949 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.18□□□□□ -1.42
RETP07949 TMA16P2-201ENST00000413187 601 ntBASIC6.18□□□□□ -1.42
RETP07949 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 RPL34P3-201ENST00000421454 338 ntBASIC6.18□□□□□ -1.42
RETP07949 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.18□□□□□ -1.42
RETP07949 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.18□□□□□ -1.42
RETP07949 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.18□□□□□ -1.42
RETP07949 AC009237.1-201ENST00000442127 744 ntBASIC6.18□□□□□ -1.42
RETP07949 TRIM60P16-201ENST00000444048 694 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms