Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CYP4F32P-201ENST00000426492 504 ntBASIC2.48□□□□□ -2.01
USH2AO75445 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 AC026826.1-201ENST00000493002 361 ntBASIC2.48□□□□□ -2.01
USH2AO75445 COX6B1P5-201ENST00000509843 249 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC068831.4-201ENST00000556118 109 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC2.48□□□□□ -2.01
USH2AO75445 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 LRRC37A6P-202ENST00000448648 5444 ntBASIC2.48□□□□□ -2.01
USH2AO75445 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 RNU1-64P-201ENST00000365443 163 ntBASIC2.48□□□□□ -2.01
USH2AO75445 NIFKP3-201ENST00000417799 865 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 AC069366.1-201ENST00000583159 838 ntBASIC2.48□□□□□ -2.01
USH2AO75445 MIR3158-1-201ENST00000583596 81 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC005084.1-201ENST00000605160 304 ntBASIC2.48□□□□□ -2.01
USH2AO75445 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC004777.1-201ENST00000624317 287 ntBASIC2.48□□□□□ -2.01
USH2AO75445 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC2.48□□□□□ -2.01
USH2AO75445 AC105114.1-201ENST00000624795 1862 ntBASIC2.48□□□□□ -2.01
USH2AO75445 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 AC078846.1-201ENST00000608694 7083 ntBASIC2.48□□□□□ -2.01
USH2AO75445 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 CCT8P1-201ENST00000413611 1657 ntBASIC2.48□□□□□ -2.01
USH2AO75445 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 AP001324.1-201ENST00000428553 399 ntBASIC2.48□□□□□ -2.01
USH2AO75445 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC2.48□□□□□ -2.01
USH2AO75445 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 DUTP1-201ENST00000493631 470 ntBASIC2.48□□□□□ -2.01
USH2AO75445 IGLV3-24-201ENST00000517477 197 ntBASIC2.48□□□□□ -2.01
USH2AO75445 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 MLECP1-201ENST00000615893 709 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 SFTPD-AS1-201ENST00000608229 5001 ntBASIC2.48□□□□□ -2.01
USH2AO75445 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
USH2AO75445 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 AL034546.1-201ENST00000623740 3693 ntBASIC2.48□□□□□ -2.01
USH2AO75445 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 ERG-206ENST00000398911 4914 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 PWAR1-201ENST00000624188 2414 ntBASIC2.47□□□□□ -2.01
USH2AO75445 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 AP004607.3-201ENST00000530354 3915 ntBASIC2.47□□□□□ -2.01
USH2AO75445 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 FRG2FP-204ENST00000453982 852 ntBASIC2.47□□□□□ -2.01
USH2AO75445 ACA64.4-201ENST00000459070 127 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.47□□□□□ -2.01
USH2AO75445 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms