Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 ESPNP-201ENST00000270691 2015 ntBASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 AD000864.1-201ENST00000624076 2295 ntBASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 AC006077.2-201ENST00000623591 457 ntBASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01558Q9Y6Z2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 AC012317.2-201ENST00000623305 2251 ntBASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 ABALON-201ENST00000629058 1903 ntBASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms