Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA3PQ9Y6N3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA3PQ9Y6N3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CLCA3PQ9Y6N3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA3PQ9Y6N3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCA3PQ9Y6N3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 TMEM191A-211ENST00000637163 1067 ntBASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 AC073648.6-201ENST00000641589 218 ntBASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA3PQ9Y6N3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA3PQ9Y6N3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
CLCA3PQ9Y6N3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 AC069544.1-201ENST00000609399 999 ntBASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCA3PQ9Y6N3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 AC087289.5-201ENST00000586076 3175 ntBASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 BX119927.1-201ENST00000636596 1552 ntBASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 AL162377.1-201ENST00000618844 1793 ntBASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCA3PQ9Y6N3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms