Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 AC135050.7-201ENST00000624508 2218 ntBASIC14.4□□□□□ -0.1
COX11Q9Y6N1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 AC123595.1-201ENST00000440769 1046 ntBASIC14.4□□□□□ -0.1
COX11Q9Y6N1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 SMUG1P1-201ENST00000590640 811 ntBASIC14.4□□□□□ -0.1
COX11Q9Y6N1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COX11Q9Y6N1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
COX11Q9Y6N1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 MST1L-201ENST00000442552 2185 ntBASIC14.39□□□□□ -0.11
COX11Q9Y6N1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
COX11Q9Y6N1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.38□□□□□ -0.11
COX11Q9Y6N1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 PLK5-205ENST00000642079 1969 ntBASIC14.38□□□□□ -0.11
COX11Q9Y6N1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 LINC02228-203ENST00000641970 1355 ntBASIC14.38□□□□□ -0.11
COX11Q9Y6N1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 ZNRF2P3-201ENST00000424200 374 ntBASIC14.38□□□□□ -0.11
COX11Q9Y6N1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 AC068880.1-201ENST00000507289 2297 ntBASIC14.38□□□□□ -0.11
COX11Q9Y6N1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.38□□□□□ -0.11
COX11Q9Y6N1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COX11Q9Y6N1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms