Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4B1Q9Y6B7 AL138781.2-201ENST00000617896 1843 ntBASIC18.88■□□□□ 0.61
AP4B1Q9Y6B7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4B1Q9Y6B7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 AC231657.2-201ENST00000624556 255 ntBASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 AC073111.5-205ENST00000641717 521 ntBASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4B1Q9Y6B7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 TERF1P5-201ENST00000477545 1207 ntBASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 DUX4L16-201ENST00000555130 1264 ntBASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4B1Q9Y6B7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 CDCA4P2-201ENST00000441182 718 ntBASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 AC026185.1-201ENST00000445748 174 ntBASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 LTB4R2-202ENST00000528054 3092 ntBASIC18.85■□□□□ 0.61
AP4B1Q9Y6B7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4B1Q9Y6B7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms