Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 MIR3960-201ENST00000583311 91 ntBASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 AL162727.3-201ENST00000635661 2787 ntBASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 AC005559.1-201ENST00000589661 871 ntBASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS1Q9Y6A9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 TMEM179-206ENST00000616017 1645 ntBASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 AL596257.1-201ENST00000641463 2694 ntBASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 SETD8P1-201ENST00000623146 1180 ntBASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.53□□□□□ -0.24
SPCS1Q9Y6A9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 CICP6-201ENST00000457191 2729 ntBASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS1Q9Y6A9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS1Q9Y6A9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC13.52□□□□□ -0.25
SPCS1Q9Y6A9 AC009086.3-201ENST00000623486 1008 ntBASIC13.52□□□□□ -0.25
SPCS1Q9Y6A9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS1Q9Y6A9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms