Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 BX276092.2-201ENST00000417668 665 ntBASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 AL691432.2-201ENST00000607222 2038 ntBASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB3Q9Y5G1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 HLA-G-202ENST00000376815 851 ntBASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 HLA-G-203ENST00000376818 1127 ntBASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 LSM12P1-201ENST00000411836 588 ntBASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 MYC-209ENST00000641252 345 ntBASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 KRT8P17-201ENST00000453110 1448 ntBASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB3Q9Y5G1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHGB3Q9Y5G1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGB3Q9Y5G1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGB3Q9Y5G1 BX119927.1-201ENST00000636596 1552 ntBASIC18.64■□□□□ 0.58
PCDHGB3Q9Y5G1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 AL355472.2-201ENST00000422958 438 ntBASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 AC097658.1-201ENST00000475555 843 ntBASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 KRT8P20-201ENST00000423953 1409 ntBASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB3Q9Y5G1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 C2orf69P4-201ENST00000565394 541 ntBASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 KRT16P6-202ENST00000425692 1426 ntBASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB3Q9Y5G1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 AC005332.7-201ENST00000614046 2005 ntBASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms