Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB13Q9Y5F0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB13Q9Y5F0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB13Q9Y5F0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB13Q9Y5F0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB13Q9Y5F0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 KRT17P3-201ENST00000420566 1262 ntBASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB13Q9Y5F0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB13Q9Y5F0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 AC125437.2-201ENST00000625180 2167 ntBASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB13Q9Y5F0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms