Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 AC005837.3-201ENST00000612163 286 ntBASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 MKRN4P-201ENST00000444706 1521 ntBASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 EDA-201ENST00000338901 1233 ntBASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 AC024257.2-201ENST00000549699 147 ntBASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH1Q9Y2L9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 AC011298.3-201ENST00000615796 283 ntBASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 AC106820.2-201ENST00000563775 3264 ntBASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH1Q9Y2L9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 WIZP1-201ENST00000531444 2299 ntBASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH1Q9Y2L9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 AC099398.1-201ENST00000567919 2776 ntBASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 SERBP1P1-201ENST00000396021 1160 ntBASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms