Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 AC016405.3-201ENST00000607710 860 ntBASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HHLA3Q9XRX5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 RARRES2P4-201ENST00000514074 484 ntBASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 AC092437.1-201ENST00000624794 1048 ntBASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 AC093484.2-201ENST00000580996 2166 ntBASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 AC092720.2-201ENST00000602388 1665 ntBASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.38□□□□□ -0.11
HHLA3Q9XRX5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HHLA3Q9XRX5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms