Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 HLA-A-209ENST00000638375 975 ntBASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 TSPY14P-201ENST00000303979 915 ntBASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 SLC25A1P4-201ENST00000567977 778 ntBASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1R1Q9NWW0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
HCFC1R1Q9NWW0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HCFC1R1Q9NWW0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HCFC1R1Q9NWW0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 RCC2P6-201ENST00000526625 1557 ntBASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 EGLN1P1-201ENST00000531623 762 ntBASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 AC130371.2-201ENST00000619443 611 ntBASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 AC006011.2-201ENST00000621313 1158 ntBASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1R1Q9NWW0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 LIN28AP1-201ENST00000429574 405 ntBASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 WWOX-216ENST00000569818 525 ntBASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 AC011298.2-201ENST00000617989 482 ntBASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1R1Q9NWW0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 ATP5G1P1-201ENST00000448724 379 ntBASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms