Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 AF201337.1-201ENST00000520239 748 ntBASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 AC100791.3-201ENST00000617619 330 ntBASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 AL050303.2-201ENST00000619798 666 ntBASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 AC090340.1-201ENST00000620778 4980 ntBASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 AL020996.1-203ENST00000536896 2307 ntBASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIN7CQ9NUP9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 AC098818.2-201ENST00000564925 2320 ntBASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 NCF1B-203ENST00000435988 1254 ntBASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 AC093484.2-201ENST00000580996 2166 ntBASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LIN7CQ9NUP9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN7CQ9NUP9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.33■□□□□ 0.21
LIN7CQ9NUP9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LIN7CQ9NUP9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN7CQ9NUP9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIN7CQ9NUP9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 AP000974.1-201ENST00000623909 2387 ntBASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 GPX1P1-201ENST00000388829 606 ntBASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 AC009237.14-201ENST00000609975 1594 ntBASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIN7CQ9NUP9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms