Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.39■□□□□ 0.86
HPS4Q9NQG7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HPS4Q9NQG7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.39■□□□□ 0.86
HPS4Q9NQG7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HPS4Q9NQG7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.39■□□□□ 0.86
HPS4Q9NQG7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 KRT16P1-201ENST00000399124 1418 ntBASIC20.39■□□□□ 0.85
HPS4Q9NQG7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS4Q9NQG7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 DPP3P2-201ENST00000416030 1696 ntBASIC20.38■□□□□ 0.85
HPS4Q9NQG7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 AL390955.1-201ENST00000428694 934 ntBASIC20.38■□□□□ 0.85
HPS4Q9NQG7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS4Q9NQG7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 AC006128.1-201ENST00000624704 1661 ntBASIC20.37■□□□□ 0.85
HPS4Q9NQG7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.37■□□□□ 0.85
HPS4Q9NQG7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 CYP2D8P-201ENST00000433633 1490 ntBASIC20.36■□□□□ 0.85
HPS4Q9NQG7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HPS4Q9NQG7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HPS4Q9NQG7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS4Q9NQG7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms