Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 AL589743.5-201ENST00000616611 1050 ntBASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.89■□□□□ 0.61
TIMMDC1Q9NPL8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 AL355472.2-201ENST00000422958 438 ntBASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMMDC1Q9NPL8 AC005332.8-201ENST00000622750 2735 ntBASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 KRT18P68-201ENST00000392293 1000 ntBASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 RNA5SP413-201ENST00000516373 109 ntBASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 MYC-209ENST00000641252 345 ntBASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMMDC1Q9NPL8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 ABHD17AP1-201ENST00000358206 933 ntBASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.86■□□□□ 0.61
TIMMDC1Q9NPL8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms