Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 AC079140.4-201ENST00000507448 529 ntBASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 AC005082.1-201ENST00000413042 2259 ntBASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 DPP3P2-201ENST00000416030 1696 ntBASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 PBX2P1-201ENST00000493219 1291 ntBASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AP001330.3-201ENST00000520123 633 ntBASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 TPRG1LP1-201ENST00000598702 760 ntBASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 RASA4CP-201ENST00000424092 1398 ntBASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SND1-IT1Q9HBX3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 AC138907.5-202ENST00000569484 235 ntBASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SND1-IT1Q9HBX3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms