Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.79■□□□□ 0.6
PIF1Q9H611 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.79■□□□□ 0.6
PIF1Q9H611 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PIF1Q9H611 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PIF1Q9H611 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PIF1Q9H611 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PIF1Q9H611 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.78■□□□□ 0.6
PIF1Q9H611 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.78■□□□□ 0.6
PIF1Q9H611 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PIF1Q9H611 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.78■□□□□ 0.6
PIF1Q9H611 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.78■□□□□ 0.6
PIF1Q9H611 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PIF1Q9H611 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.78■□□□□ 0.6
PIF1Q9H611 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.78■□□□□ 0.6
PIF1Q9H611 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.78■□□□□ 0.6
PIF1Q9H611 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.78■□□□□ 0.6
PIF1Q9H611 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.78■□□□□ 0.6
PIF1Q9H611 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
PIF1Q9H611 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.78■□□□□ 0.6
PIF1Q9H611 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PIF1Q9H611 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.77■□□□□ 0.6
PIF1Q9H611 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PIF1Q9H611 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PIF1Q9H611 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
PIF1Q9H611 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.77■□□□□ 0.6
PIF1Q9H611 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.77■□□□□ 0.6
PIF1Q9H611 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.77■□□□□ 0.6
PIF1Q9H611 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PIF1Q9H611 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.77■□□□□ 0.6
PIF1Q9H611 NTF6G-201ENST00000591094 616 ntBASIC18.77■□□□□ 0.6
PIF1Q9H611 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.77■□□□□ 0.6
PIF1Q9H611 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 HCG11-201ENST00000411553 5696 ntBASIC18.77■□□□□ 0.6
PIF1Q9H611 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.77■□□□□ 0.6
PIF1Q9H611 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
PIF1Q9H611 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PIF1Q9H611 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PIF1Q9H611 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PIF1Q9H611 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PIF1Q9H611 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 AL032819.2-201ENST00000624543 2162 ntBASIC18.76■□□□□ 0.59
PIF1Q9H611 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
PIF1Q9H611 PGM5P4-201ENST00000421970 445 ntBASIC18.76■□□□□ 0.59
PIF1Q9H611 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PIF1Q9H611 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
PIF1Q9H611 NEFHP1-201ENST00000412845 2629 ntBASIC18.76■□□□□ 0.59
PIF1Q9H611 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PIF1Q9H611 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PIF1Q9H611 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PIF1Q9H611 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.75■□□□□ 0.59
PIF1Q9H611 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PIF1Q9H611 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PIF1Q9H611 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.75■□□□□ 0.59
PIF1Q9H611 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms