Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LHX5Q9H2C1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LHX5Q9H2C1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LHX5Q9H2C1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LHX5Q9H2C1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.83■□□□□ 0.92
LHX5Q9H2C1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LHX5Q9H2C1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 AC093827.2-201ENST00000512654 315 ntBASIC20.81■□□□□ 0.92
LHX5Q9H2C1 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 AC006058.3-201ENST00000606217 1069 ntBASIC20.81■□□□□ 0.92
LHX5Q9H2C1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LHX5Q9H2C1 AL158211.5-201ENST00000623583 2518 ntBASIC20.8■□□□□ 0.92
LHX5Q9H2C1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LHX5Q9H2C1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 KRT17P3-201ENST00000420566 1262 ntBASIC20.79■□□□□ 0.92
LHX5Q9H2C1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.79■□□□□ 0.92
LHX5Q9H2C1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms