Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VPS16Q9H269 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
VPS16Q9H269 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VPS16Q9H269 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.64■■□□□ 1.06
VPS16Q9H269 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VPS16Q9H269 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VPS16Q9H269 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.64■■□□□ 1.06
VPS16Q9H269 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.64■■□□□ 1.05
VPS16Q9H269 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
VPS16Q9H269 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.64■■□□□ 1.05
VPS16Q9H269 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 AL589743.5-201ENST00000616611 1050 ntBASIC21.64■■□□□ 1.05
VPS16Q9H269 OR10C1-204ENST00000622521 1039 ntBASIC21.64■■□□□ 1.05
VPS16Q9H269 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.64■■□□□ 1.05
VPS16Q9H269 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
VPS16Q9H269 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.64■■□□□ 1.05
VPS16Q9H269 AL032819.2-201ENST00000624543 2162 ntBASIC21.64■■□□□ 1.05
VPS16Q9H269 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS16Q9H269 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.63■■□□□ 1.05
VPS16Q9H269 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
VPS16Q9H269 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS16Q9H269 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS16Q9H269 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS16Q9H269 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS16Q9H269 AL162430.1-201ENST00000480705 870 ntBASIC21.62■■□□□ 1.05
VPS16Q9H269 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS16Q9H269 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS16Q9H269 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS16Q9H269 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS16Q9H269 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS16Q9H269 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS16Q9H269 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS16Q9H269 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
VPS16Q9H269 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.62■■□□□ 1.05
VPS16Q9H269 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS16Q9H269 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS16Q9H269 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
VPS16Q9H269 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VPS16Q9H269 AC023632.3-201ENST00000521633 145 ntBASIC21.61■■□□□ 1.05
VPS16Q9H269 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.61■■□□□ 1.05
VPS16Q9H269 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.61■■□□□ 1.05
VPS16Q9H269 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VPS16Q9H269 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS16Q9H269 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VPS16Q9H269 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
VPS16Q9H269 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VPS16Q9H269 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS16Q9H269 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS16Q9H269 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
VPS16Q9H269 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS16Q9H269 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS16Q9H269 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VPS16Q9H269 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS16Q9H269 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 AC004911.1-201ENST00000416316 871 ntBASIC21.6■■□□□ 1.05
VPS16Q9H269 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.6■■□□□ 1.05
VPS16Q9H269 MIR5787-201ENST00000611784 55 ntBASIC21.6■■□□□ 1.05
VPS16Q9H269 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS16Q9H269 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
VPS16Q9H269 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
VPS16Q9H269 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS16Q9H269 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS16Q9H269 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS16Q9H269 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms