Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.07■□□□□ 0.96
CDH23Q9H251 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH23Q9H251 UNC93B7-201ENST00000509439 705 ntBASIC21.07■□□□□ 0.96
CDH23Q9H251 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH23Q9H251 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH23Q9H251 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH23Q9H251 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDH23Q9H251 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH23Q9H251 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH23Q9H251 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH23Q9H251 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH23Q9H251 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH23Q9H251 AL022342.1-201ENST00000400363 863 ntBASIC21.06■□□□□ 0.96
CDH23Q9H251 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH23Q9H251 LINC01465-201ENST00000408887 1940 ntBASIC21.06■□□□□ 0.96
CDH23Q9H251 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH23Q9H251 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH23Q9H251 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CDH23Q9H251 KRT18P38-201ENST00000449496 1282 ntBASIC21.06■□□□□ 0.96
CDH23Q9H251 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH23Q9H251 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CDH23Q9H251 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH23Q9H251 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH23Q9H251 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH23Q9H251 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.06■□□□□ 0.96
CDH23Q9H251 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CDH23Q9H251 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH23Q9H251 AC010653.2-201ENST00000623505 997 ntBASIC21.06■□□□□ 0.96
CDH23Q9H251 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH23Q9H251 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH23Q9H251 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH23Q9H251 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH23Q9H251 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH23Q9H251 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.05■□□□□ 0.96
CDH23Q9H251 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDH23Q9H251 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH23Q9H251 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH23Q9H251 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDH23Q9H251 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH23Q9H251 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH23Q9H251 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH23Q9H251 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH23Q9H251 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH23Q9H251 AL024507.2-201ENST00000606070 2574 ntBASIC21.05■□□□□ 0.96
CDH23Q9H251 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH23Q9H251 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH23Q9H251 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH23Q9H251 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH23Q9H251 SPDYE13P-201ENST00000445314 798 ntBASIC21.05■□□□□ 0.96
CDH23Q9H251 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH23Q9H251 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDH23Q9H251 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
CDH23Q9H251 HOMER2P1-201ENST00000455653 964 ntBASIC21.04■□□□□ 0.96
CDH23Q9H251 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH23Q9H251 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH23Q9H251 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDH23Q9H251 AC104692.2-201ENST00000603054 253 ntBASIC21.04■□□□□ 0.96
CDH23Q9H251 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH23Q9H251 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH23Q9H251 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CDH23Q9H251 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH23Q9H251 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 MIR3180-1-201ENST00000580374 94 ntBASIC21.03■□□□□ 0.96
CDH23Q9H251 MIR3180-3-201ENST00000584616 94 ntBASIC21.03■□□□□ 0.96
CDH23Q9H251 AP000692.2-201ENST00000608391 879 ntBASIC21.03■□□□□ 0.96
CDH23Q9H251 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH23Q9H251 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH23Q9H251 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH23Q9H251 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CDH23Q9H251 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH23Q9H251 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CDH23Q9H251 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH23Q9H251 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.02■□□□□ 0.96
CDH23Q9H251 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.02■□□□□ 0.96
CDH23Q9H251 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH23Q9H251 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
CDH23Q9H251 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH23Q9H251 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms