Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.41■■□□□ 1.02
CDT1Q9H211 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.41■■□□□ 1.02
CDT1Q9H211 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 MIR4497-201ENST00000583208 89 ntBASIC21.41■■□□□ 1.02
CDT1Q9H211 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDT1Q9H211 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
CDT1Q9H211 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDT1Q9H211 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CDT1Q9H211 AL353807.1-201ENST00000427475 662 ntBASIC21.4■■□□□ 1.02
CDT1Q9H211 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.4■■□□□ 1.02
CDT1Q9H211 TSPY7P-201ENST00000431358 1114 ntBASIC21.4■■□□□ 1.02
CDT1Q9H211 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.4■■□□□ 1.02
CDT1Q9H211 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDT1Q9H211 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDT1Q9H211 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.4■■□□□ 1.02
CDT1Q9H211 C1QL1P1-201ENST00000568105 661 ntBASIC21.4■■□□□ 1.02
CDT1Q9H211 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDT1Q9H211 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDT1Q9H211 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
CDT1Q9H211 TMEM179-206ENST00000616017 1645 ntBASIC21.4■■□□□ 1.02
CDT1Q9H211 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDT1Q9H211 AC009237.14-201ENST00000609975 1594 ntBASIC21.4■■□□□ 1.02
CDT1Q9H211 AC112907.3-201ENST00000577781 2400 ntBASIC21.39■■□□□ 1.02
CDT1Q9H211 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDT1Q9H211 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDT1Q9H211 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CDT1Q9H211 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDT1Q9H211 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDT1Q9H211 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CDT1Q9H211 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.39■■□□□ 1.01
CDT1Q9H211 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CDT1Q9H211 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.39■■□□□ 1.01
CDT1Q9H211 AP001412.1-201ENST00000608405 714 ntBASIC21.39■■□□□ 1.01
CDT1Q9H211 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CDT1Q9H211 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.39■■□□□ 1.01
CDT1Q9H211 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.38■■□□□ 1.01
CDT1Q9H211 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDT1Q9H211 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.38■■□□□ 1.01
CDT1Q9H211 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.38■■□□□ 1.01
CDT1Q9H211 AL353708.3-201ENST00000610272 989 ntBASIC21.38■■□□□ 1.01
CDT1Q9H211 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDT1Q9H211 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.38■■□□□ 1.01
CDT1Q9H211 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDT1Q9H211 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDT1Q9H211 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CDT1Q9H211 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.37■■□□□ 1.01
CDT1Q9H211 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 TUBB8P6-201ENST00000436895 1288 ntBASIC21.37■■□□□ 1.01
CDT1Q9H211 AP002982.1-201ENST00000492365 877 ntBASIC21.37■■□□□ 1.01
CDT1Q9H211 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.37■■□□□ 1.01
CDT1Q9H211 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.37■■□□□ 1.01
CDT1Q9H211 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.37■■□□□ 1.01
CDT1Q9H211 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.37■■□□□ 1.01
CDT1Q9H211 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDT1Q9H211 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.37■■□□□ 1.01
CDT1Q9H211 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDT1Q9H211 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.36■■□□□ 1.01
CDT1Q9H211 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms