Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 AL512625.2-201ENST00000417533 625 ntBASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2J3Q9H1A7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 Z82202.1-201ENST00000623446 1880 ntBASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR2J3Q9H1A7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 C2orf69P4-201ENST00000565394 541 ntBASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR2J3Q9H1A7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 AC010980.2-201ENST00000587099 1412 ntBASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms