Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SEC22CQ9BRL7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 KRT8P36-201ENST00000489121 1440 ntBASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 AC090164.3-201ENST00000610780 2143 ntBASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 EEF1DP3-203ENST00000566025 782 ntBASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 AC009237.14-201ENST00000609975 1594 ntBASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC22CQ9BRL7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 SERBP1P1-201ENST00000396021 1160 ntBASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 SRD5A1P1-201ENST00000442297 786 ntBASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 AC053503.5-201ENST00000601508 636 ntBASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 NOC2LP2-201ENST00000407594 1944 ntBASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 AC068880.1-201ENST00000507289 2297 ntBASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC22CQ9BRL7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SEC22CQ9BRL7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms