Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.34■■□□□ 1.33
NEK1Q96PY6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK1Q96PY6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.33■■□□□ 1.33
NEK1Q96PY6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.33■■□□□ 1.33
NEK1Q96PY6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK1Q96PY6 AC008687.6-201ENST00000596318 630 ntBASIC23.33■■□□□ 1.33
NEK1Q96PY6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.33■■□□□ 1.33
NEK1Q96PY6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NEK1Q96PY6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.33■■□□□ 1.32
NEK1Q96PY6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
NEK1Q96PY6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
NEK1Q96PY6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 UNC93B4-201ENST00000505679 747 ntBASIC23.32■■□□□ 1.32
NEK1Q96PY6 UNC93B5-201ENST00000530315 699 ntBASIC23.32■■□□□ 1.32
NEK1Q96PY6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NEK1Q96PY6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK1Q96PY6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK1Q96PY6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK1Q96PY6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms