Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 AC008040.2-201ENST00000461049 708 ntBASIC16.76■□□□□ 0.27
SPG11Q96JI7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPG11Q96JI7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPG11Q96JI7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPG11Q96JI7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPG11Q96JI7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPG11Q96JI7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPG11Q96JI7 RN7SL510P-201ENST00000581311 263 ntBASIC16.76■□□□□ 0.27
SPG11Q96JI7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPG11Q96JI7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 AL024507.2-201ENST00000606070 2574 ntBASIC16.75■□□□□ 0.27
SPG11Q96JI7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPG11Q96JI7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPG11Q96JI7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPG11Q96JI7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 AC004951.3-201ENST00000418645 1148 ntBASIC16.75■□□□□ 0.27
SPG11Q96JI7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 AC116562.4-202ENST00000641738 218 ntBASIC16.75■□□□□ 0.27
SPG11Q96JI7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SPG11Q96JI7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPG11Q96JI7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 AC069148.1-201ENST00000608741 768 ntBASIC16.74■□□□□ 0.27
SPG11Q96JI7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.74■□□□□ 0.27
SPG11Q96JI7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 AC008622.2-201ENST00000617006 1229 ntBASIC16.73■□□□□ 0.27
SPG11Q96JI7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 AC018553.1-201ENST00000616682 1458 ntBASIC16.73■□□□□ 0.27
SPG11Q96JI7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.73■□□□□ 0.27
SPG11Q96JI7 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.73■□□□□ 0.27
SPG11Q96JI7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPG11Q96JI7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 HYMAI.1-201ENST00000620949 238 ntBASIC16.72■□□□□ 0.27
SPG11Q96JI7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms