Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 HTR7P1-201ENST00000538670 1336 ntBASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 AC009237.14-201ENST00000609975 1594 ntBASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 AL353807.1-201ENST00000427475 662 ntBASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 TCF3P1-201ENST00000423021 1937 ntBASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCD1Q96GM5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 KRT18P16-201ENST00000510337 1294 ntBASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCD1Q96GM5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCD1Q96GM5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCD1Q96GM5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCD1Q96GM5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 AP001412.1-201ENST00000608405 714 ntBASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCD1Q96GM5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 TMEM179-206ENST00000616017 1645 ntBASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 TUBB8P6-201ENST00000436895 1288 ntBASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCD1Q96GM5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms