Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH3KBP1Q96B97 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.52■□□□□ 0.71
SH3KBP1Q96B97 HCG11-201ENST00000411553 5696 ntBASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3KBP1Q96B97 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AC008550.1-201ENST00000511500 884 ntBASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 SMG8-203ENST00000578922 2178 ntBASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3KBP1Q96B97 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 AC239809.2-201ENST00000415381 517 ntBASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 AC133681.1-201ENST00000465482 601 ntBASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.49■□□□□ 0.71
SH3KBP1Q96B97 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 PCDHAC2-203ENST00000615316 3011 ntBASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.48■□□□□ 0.71
SH3KBP1Q96B97 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms