Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 AL121829.2-201ENST00000620908 328 ntBASIC20.75■□□□□ 0.91
ATP2A3Q93084 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP2A3Q93084 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A3Q93084 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A3Q93084 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A3Q93084 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2A3Q93084 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2A3Q93084 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.74■□□□□ 0.91
ATP2A3Q93084 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2A3Q93084 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2A3Q93084 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A3Q93084 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A3Q93084 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A3Q93084 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
ATP2A3Q93084 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 TSPY7P-201ENST00000431358 1114 ntBASIC20.73■□□□□ 0.91
ATP2A3Q93084 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2A3Q93084 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A3Q93084 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 MIR4785-201ENST00000585005 73 ntBASIC20.72■□□□□ 0.91
ATP2A3Q93084 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A3Q93084 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ATP2A3Q93084 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 AC007225.1-201ENST00000566331 1836 ntBASIC20.71■□□□□ 0.91
ATP2A3Q93084 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ATP2A3Q93084 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A3Q93084 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ATP2A3Q93084 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms