Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 AC005181.1-201ENST00000604782 1256 ntBASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 AC023632.3-201ENST00000521633 145 ntBASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 AC022517.1-201ENST00000592429 346 ntBASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATG4AQ8WYN0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATG4AQ8WYN0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATG4AQ8WYN0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATG4AQ8WYN0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATG4AQ8WYN0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATG4AQ8WYN0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATG4AQ8WYN0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 MIR5787-201ENST00000611784 55 ntBASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATG4AQ8WYN0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.38■□□□□ 0.85
ATG4AQ8WYN0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms