Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 AL353708.3-201ENST00000610272 989 ntBASIC17.89■□□□□ 0.45
RNF138Q8WVD3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RNF138Q8WVD3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 FAM197Y4-202ENST00000622692 608 ntBASIC17.88■□□□□ 0.45
RNF138Q8WVD3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 TREX1-205ENST00000625293 1783 ntBASIC17.88■□□□□ 0.45
RNF138Q8WVD3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 KRT8P8-201ENST00000434750 1448 ntBASIC17.88■□□□□ 0.45
RNF138Q8WVD3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF138Q8WVD3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF138Q8WVD3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF138Q8WVD3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms