Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 AL390961.4-201ENST00000623958 2535 ntBASIC18■□□□□ 0.47
CNIH3Q8TBE1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 AC010141.2-201ENST00000452426 721 ntBASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 AC012414.1-201ENST00000556676 535 ntBASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 AL133373.2-201ENST00000623187 2828 ntBASIC17.99■□□□□ 0.47
CNIH3Q8TBE1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 AC027682.1-201ENST00000562846 899 ntBASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 AC135279.3-201ENST00000610945 1311 ntBASIC17.98■□□□□ 0.47
CNIH3Q8TBE1 AL161938.1-201ENST00000569833 2180 ntBASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.97■□□□□ 0.47
CNIH3Q8TBE1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms