Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNEP1R1Q8N9A8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNEP1R1Q8N9A8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNEP1R1Q8N9A8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.52■□□□□ 0.39
CNEP1R1Q8N9A8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNEP1R1Q8N9A8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.52■□□□□ 0.39
CNEP1R1Q8N9A8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNEP1R1Q8N9A8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 AC073314.1-201ENST00000568729 2216 ntBASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.5■□□□□ 0.39
CNEP1R1Q8N9A8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 FAM197Y1-201ENST00000421178 764 ntBASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 CD177P1-201ENST00000606252 935 ntBASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNEP1R1Q8N9A8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 AL355355.2-201ENST00000442321 338 ntBASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 TFP1-202ENST00000475455 1573 ntBASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms