Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM48Q8IWZ4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 AC020907.5-201ENST00000624372 1936 ntBASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 AC004264.1-201ENST00000608354 794 ntBASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM48Q8IWZ4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 AL135905.2-201ENST00000584934 1404 ntBASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM48Q8IWZ4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 AL391422.3-201ENST00000603791 2761 ntBASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM48Q8IWZ4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms