Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 AC083906.2-201ENST00000511578 360 ntBASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 AC120498.9-201ENST00000339021 3867 ntBASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 MIPEPP3-201ENST00000412105 444 ntBASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 AL121832.2-201ENST00000610979 668 ntBASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 AC093484.2-201ENST00000580996 2166 ntBASIC17.42■□□□□ 0.38
LINC00346Q8IVM7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00346Q8IVM7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 DUSP5P2-201ENST00000426873 1033 ntBASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms