Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.13■□□□□ 0.49
TUBA1AQ71U36 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AL050303.2-201ENST00000619798 666 ntBASIC18.13■□□□□ 0.49
TUBA1AQ71U36 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AC120498.9-201ENST00000339021 3867 ntBASIC18.13■□□□□ 0.49
TUBA1AQ71U36 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 AC068338.2-201ENST00000563278 1430 ntBASIC18.13■□□□□ 0.49
TUBA1AQ71U36 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBA1AQ71U36 TMEM179-206ENST00000616017 1645 ntBASIC18.12■□□□□ 0.49
TUBA1AQ71U36 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 AC091799.1-201ENST00000422823 811 ntBASIC18.12■□□□□ 0.49
TUBA1AQ71U36 CYP2T1P-201ENST00000432607 1285 ntBASIC18.12■□□□□ 0.49
TUBA1AQ71U36 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 AC243732.1-201ENST00000612648 864 ntBASIC18.12■□□□□ 0.49
TUBA1AQ71U36 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1AQ71U36 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.11■□□□□ 0.49
TUBA1AQ71U36 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 AC016405.3-201ENST00000607710 860 ntBASIC18.11■□□□□ 0.49
TUBA1AQ71U36 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TUBA1AQ71U36 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 AL138781.2-201ENST00000617896 1843 ntBASIC18.1■□□□□ 0.49
TUBA1AQ71U36 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1AQ71U36 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms