Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC4Q6S5L8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC4Q6S5L8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.26■■□□□ 1.15
SHC4Q6S5L8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 AC073210.2-201ENST00000430369 194 ntBASIC22.25■■□□□ 1.15
SHC4Q6S5L8 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.25■■□□□ 1.15
SHC4Q6S5L8 AC091874.3-201ENST00000512672 1195 ntBASIC22.25■■□□□ 1.15
SHC4Q6S5L8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC4Q6S5L8 TFP1-202ENST00000475455 1573 ntBASIC22.25■■□□□ 1.15
SHC4Q6S5L8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 TSPY6P-201ENST00000448518 926 ntBASIC22.24■■□□□ 1.15
SHC4Q6S5L8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC4Q6S5L8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.23■■□□□ 1.15
SHC4Q6S5L8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 AC124283.5-201ENST00000624661 1809 ntBASIC22.22■■□□□ 1.15
SHC4Q6S5L8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.22■■□□□ 1.15
SHC4Q6S5L8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.21■■□□□ 1.15
SHC4Q6S5L8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms