Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 AC093787.1-201ENST00000450396 207 ntBASIC18.36■□□□□ 0.53
REEP3Q6NUK4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.36■□□□□ 0.53
REEP3Q6NUK4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
REEP3Q6NUK4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 AC005181.1-201ENST00000604782 1256 ntBASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MIR5787-201ENST00000611784 55 ntBASIC18.35■□□□□ 0.53
REEP3Q6NUK4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 AL032819.2-201ENST00000624543 2162 ntBASIC18.35■□□□□ 0.53
REEP3Q6NUK4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
REEP3Q6NUK4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 LSM12P1-201ENST00000411836 588 ntBASIC18.34■□□□□ 0.53
REEP3Q6NUK4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
REEP3Q6NUK4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.33■□□□□ 0.53
REEP3Q6NUK4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 TNXA-203ENST00000507684 2038 ntBASIC18.33■□□□□ 0.52
REEP3Q6NUK4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
REEP3Q6NUK4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms