Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 AC006128.1-201ENST00000624704 1661 ntBASIC17.8■□□□□ 0.44
RTL6Q6ICC9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 HLA-G-202ENST00000376815 851 ntBASIC17.8■□□□□ 0.44
RTL6Q6ICC9 HLA-G-203ENST00000376818 1127 ntBASIC17.8■□□□□ 0.44
RTL6Q6ICC9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 AL355075.4-201ENST00000554988 638 ntBASIC17.8■□□□□ 0.44
RTL6Q6ICC9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 AF186192.3-201ENST00000583427 947 ntBASIC17.8■□□□□ 0.44
RTL6Q6ICC9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL6Q6ICC9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 AL031963.3-201ENST00000606441 850 ntBASIC17.79■□□□□ 0.44
RTL6Q6ICC9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 KRT8P20-201ENST00000423953 1409 ntBASIC17.79■□□□□ 0.44
RTL6Q6ICC9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTL6Q6ICC9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL6Q6ICC9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms