Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.66■□□□□ 0.9
RNF43Q68DV7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 AL162377.1-201ENST00000618844 1793 ntBASIC20.66■□□□□ 0.9
RNF43Q68DV7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF43Q68DV7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RNF43Q68DV7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 AC018445.3-201ENST00000624177 1945 ntBASIC20.65■□□□□ 0.9
RNF43Q68DV7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF43Q68DV7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF43Q68DV7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF43Q68DV7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF43Q68DV7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF43Q68DV7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 MTDHP1-201ENST00000605323 784 ntBASIC20.64■□□□□ 0.89
RNF43Q68DV7 AC006557.6-201ENST00000623071 864 ntBASIC20.64■□□□□ 0.89
RNF43Q68DV7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 AC007225.1-201ENST00000566331 1836 ntBASIC20.64■□□□□ 0.89
RNF43Q68DV7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF43Q68DV7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF43Q68DV7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF43Q68DV7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF43Q68DV7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms