Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC124283.5-201ENST00000624661 1809 ntBASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DQA1Q5Y7H0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA1Q5Y7H0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC069544.1-201ENST00000609399 999 ntBASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 AL121829.2-201ENST00000620908 328 ntBASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 BCL2-203ENST00000589955 5011 ntBASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA1Q5Y7H0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC128676.1-201ENST00000454392 318 ntBASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 ITM2C-210ENST00000620962 501 ntBASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC073648.6-201ENST00000641589 218 ntBASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA1Q5Y7H0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms