Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 HLA-A-209ENST00000638375 975 ntBASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 MYC-208ENST00000641036 567 ntBASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 PHGDH-210ENST00000641115 1638 ntBASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 AC008040.2-201ENST00000461049 708 ntBASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 YBX1P2-201ENST00000489612 999 ntBASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD4Q5XG99 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 AL031133.1-201ENST00000406807 723 ntBASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 COX11P1-201ENST00000489116 835 ntBASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 AC010653.2-201ENST00000623505 997 ntBASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LYSMD4Q5XG99 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.39■□□□□ 0.7
LYSMD4Q5XG99 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 TSPY5P-201ENST00000426936 936 ntBASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD4Q5XG99 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.38■□□□□ 0.69
LYSMD4Q5XG99 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 FEM1AP4-201ENST00000443167 1987 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms