Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 AL031963.3-201ENST00000606441 850 ntBASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00242Q5T6M2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 AC123595.1-201ENST00000440769 1046 ntBASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00242Q5T6M2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 KRT8P20-201ENST00000423953 1409 ntBASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 AC004854.2-201ENST00000608450 1441 ntBASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00242Q5T6M2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00242Q5T6M2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms