Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.57■□□□□ 0.4
CCDC58Q4VC31 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC58Q4VC31 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 AC019069.1-201ENST00000610008 1333 ntBASIC17.55■□□□□ 0.4
CCDC58Q4VC31 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC58Q4VC31 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 AP000997.3-201ENST00000623333 2250 ntBASIC17.54■□□□□ 0.4
CCDC58Q4VC31 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCDC58Q4VC31 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms