Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 FAM197Y1-201ENST00000421178 764 ntBASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 KSR1P1-201ENST00000446298 240 ntBASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 TMEM179-206ENST00000616017 1645 ntBASIC21.37■■□□□ 1.01
DCAF4L1Q3SXM0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 AC026471.5-201ENST00000615068 467 ntBASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 AL691432.2-201ENST00000607222 2038 ntBASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 AC009237.14-201ENST00000609975 1594 ntBASIC21.36■■□□□ 1.01
DCAF4L1Q3SXM0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.35■■□□□ 1.01
DCAF4L1Q3SXM0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 LINC01006-201ENST00000333319 2292 ntBASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 KRT16P1-201ENST00000399124 1418 ntBASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DCAF4L1Q3SXM0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 AC099778.1-201ENST00000568593 1911 ntBASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 AL355355.2-201ENST00000442321 338 ntBASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.33■■□□□ 1.01
DCAF4L1Q3SXM0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
DCAF4L1Q3SXM0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms