Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE4Q2TBC4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE4Q2TBC4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE4Q2TBC4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE4Q2TBC4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PRICKLE4Q2TBC4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE4Q2TBC4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 TREX1-205ENST00000625293 1783 ntBASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 AC233263.1-201ENST00000578059 224 ntBASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
PRICKLE4Q2TBC4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 AP006587.1-201ENST00000534129 1502 ntBASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE4Q2TBC4 AL158211.5-201ENST00000623583 2518 ntBASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 MTDHP1-201ENST00000605323 784 ntBASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE4Q2TBC4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.34■□□□□ 0.53
PRICKLE4Q2TBC4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms