Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CBX1P83916 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.66■□□□□ 0.9
CBX1P83916 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 AC018695.7-201ENST00000624587 2492 ntBASIC20.66■□□□□ 0.9
CBX1P83916 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CBX1P83916 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.66■□□□□ 0.9
CBX1P83916 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.66■□□□□ 0.9
CBX1P83916 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.66■□□□□ 0.9
CBX1P83916 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CBX1P83916 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX1P83916 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.65■□□□□ 0.9
CBX1P83916 AC011484.1-201ENST00000377652 1995 ntBASIC20.65■□□□□ 0.9
CBX1P83916 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CBX1P83916 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CBX1P83916 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CBX1P83916 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CBX1P83916 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CBX1P83916 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX1P83916 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CBX1P83916 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX1P83916 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CBX1P83916 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX1P83916 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.64■□□□□ 0.9
CBX1P83916 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX1P83916 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX1P83916 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX1P83916 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX1P83916 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
CBX1P83916 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX1P83916 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX1P83916 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.64■□□□□ 0.89
CBX1P83916 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.64■□□□□ 0.89
CBX1P83916 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX1P83916 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CBX1P83916 AC006333.2-201ENST00000607957 2099 ntBASIC20.64■□□□□ 0.89
CBX1P83916 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX1P83916 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX1P83916 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX1P83916 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX1P83916 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX1P83916 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.63■□□□□ 0.89
CBX1P83916 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.63■□□□□ 0.89
CBX1P83916 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CBX1P83916 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CBX1P83916 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CBX1P83916 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX1P83916 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CBX1P83916 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CBX1P83916 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX1P83916 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.62■□□□□ 0.89
CBX1P83916 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.62■□□□□ 0.89
CBX1P83916 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms