Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 COL9A3-213ENST00000489045 838 ntTSL 519.85■□□□□ 0.779e-8■■□□□ 12.3
LSM11P83369 AC109466.1-205ENST00000523704 408 ntTSL 316.52■□□□□ 0.246e-11■■□□□ 12.3
LSM11P83369 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC15.01□□□□□ -0.016e-11■■□□□ 12.3
LSM11P83369 AC109466.1-210ENST00000519329 541 ntTSL 314.81□□□□□ -0.046e-11■■□□□ 12.3
LSM11P83369 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC14.43□□□□□ -0.16e-11■■□□□ 12.3
LSM11P83369 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC13.72□□□□□ -0.216e-11■■□□□ 12.3
LSM11P83369 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.13□□□□□ -0.316e-11■■□□□ 12.3
LSM11P83369 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC10.95□□□□□ -0.666e-11■■□□□ 12.3
LSM11P83369 AC109466.1-207ENST00000522303 526 ntTSL 510.03□□□□□ -0.86e-11■■□□□ 12.3
LSM11P83369 AC109466.1-208ENST00000522646 548 ntTSL 310.03□□□□□ -0.86e-11■■□□□ 12.3
LSM11P83369 FANCL-210ENST00000481670 522 ntTSL 38.94□□□□□ -0.986e-11■■□□□ 12.3
LSM11P83369 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.74□□□□□ -1.336e-11■■□□□ 12.3
LSM11P83369 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.284e-7■■□□□ 12.3
LSM11P83369 TMC6-224ENST00000593044 3070 ntTSL 215.13■□□□□ 0.015e-14■■□□□ 12.3
LSM11P83369 MAN2C1-212ENST00000563441 2664 ntTSL 1 (best)13.12□□□□□ -0.312e-7■■□□□ 12.3
LSM11P83369 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.321e-9■■□□□ 12.3
LSM11P83369 MMS19-219ENST00000495415 1879 ntTSL 511.59□□□□□ -0.552e-6■■□□□ 12.3
LSM11P83369 MMS19-207ENST00000434538 2164 ntTSL 211.13□□□□□ -0.632e-6■■□□□ 12.3
LSM11P83369 MMS19-204ENST00000415383 3401 ntTSL 1 (best)10.73□□□□□ -0.692e-6■■□□□ 12.3
LSM11P83369 MMS19-201ENST00000327238 3165 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.762e-6■■□□□ 12.3
LSM11P83369 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.812e-6■■□□□ 12.3
LSM11P83369 MMS19-209ENST00000438925 3797 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.832e-6■■□□□ 12.3
LSM11P83369 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.852e-6■■□□□ 12.3
LSM11P83369 ZFAND2B-217ENST00000475533 971 ntTSL 510.85□□□□□ -0.672e-8■■□□□ 12.3
LSM11P83369 PHF1-208ENST00000486845 1099 ntTSL 517.61■□□□□ 0.417e-8■■□□□ 12.3
LSM11P83369 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.83■□□□□ 0.287e-8■■□□□ 12.3
LSM11P83369 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.117e-8■■□□□ 12.3
LSM11P83369 RBM6-202ENST00000419610 2128 ntTSL 219.07■□□□□ 0.642e-7■■□□□ 12.3
LSM11P83369 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.69■□□□□ 0.582e-7■■□□□ 12.3
LSM11P83369 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.99■□□□□ 0.152e-7■■□□□ 12.3
LSM11P83369 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.232e-7■■□□□ 12.3
LSM11P83369 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.08□□□□□ -0.322e-7■■□□□ 12.3
LSM11P83369 RBM6-213ENST00000454079 4324 ntTSL 210.9□□□□□ -0.662e-7■■□□□ 12.3
LSM11P83369 RBM6-207ENST00000434592 2342 ntTSL 27.34□□□□□ -1.232e-7■■□□□ 12.3
LSM11P83369 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.171e-8■■□□□ 12.3
LSM11P83369 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.121e-8■■□□□ 12.3
LSM11P83369 PLCG1-219ENST00000612731 544 ntTSL 311.35□□□□□ -0.591e-8■■□□□ 12.3
LSM11P83369 SLC5A6-213ENST00000461757 2307 ntTSL 217.37■□□□□ 0.371e-12■■□□□ 12.3
LSM11P83369 FUBP1-208ENST00000483894 605 ntTSL 212.09□□□□□ -0.471e-8■■□□□ 12.3
LSM11P83369 FUBP1-212ENST00000492405 668 ntTSL 312.08□□□□□ -0.481e-8■■□□□ 12.3
LSM11P83369 FUBP1-213ENST00000492724 583 ntTSL 312.08□□□□□ -0.481e-8■■□□□ 12.3
LSM11P83369 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.671e-12■■□□□ 12.3
LSM11P83369 SLC5A6-217ENST00000488743 3174 ntTSL 210.82□□□□□ -0.681e-12■■□□□ 12.3
LSM11P83369 FUBP1-206ENST00000474632 639 ntTSL 210.52□□□□□ -0.731e-8■■□□□ 12.3
LSM11P83369 FUBP1-210ENST00000488814 612 ntTSL 38.95□□□□□ -0.981e-8■■□□□ 12.3
LSM11P83369 FUBP1-207ENST00000480673 262 ntTSL 37.82□□□□□ -1.161e-8■■□□□ 12.3
LSM11P83369 FUBP1-211ENST00000489495 2156 ntTSL 24.41□□□□□ -1.71e-8■■□□□ 12.3
LSM11P83369 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.28■□□□□ 0.362e-8■■□□□ 12.3
LSM11P83369 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.95■□□□□ 0.32e-8■■□□□ 12.3
LSM11P83369 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.052e-6■■□□□ 12.3
LSM11P83369 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.142e-6■■□□□ 12.3
LSM11P83369 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.442e-6■■□□□ 12.3
LSM11P83369 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.542e-6■■□□□ 12.3
LSM11P83369 C2orf82-208ENST00000481155 660 ntTSL 319.02■□□□□ 0.645e-6■■□□□ 12.3
LSM11P83369 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)18.39■□□□□ 0.535e-6■■□□□ 12.3
LSM11P83369 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)11.39□□□□□ -0.598e-10■■□□□ 12.3
LSM11P83369 DGAT1-205ENST00000527885 605 ntTSL 312.29□□□□□ -0.441e-8■■□□□ 12.3
LSM11P83369 DGAT1-202ENST00000524844 401 ntTSL 36.93□□□□□ -1.31e-8■■□□□ 12.3
LSM11P83369 BCL6-203ENST00000419510 4178 ntTSL 28.23□□□□□ -1.095e-7■■□□□ 12.2
LSM11P83369 SFPQ-209ENST00000485454 339 ntTSL 28.97□□□□□ -0.972e-7■■□□□ 12.2
LSM11P83369 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.65■■□□□ 1.226e-7■■□□□ 12.2
LSM11P83369 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.881e-7■■□□□ 12.2
LSM11P83369 GCLC-203ENST00000504525 1011 ntTSL 319.75■□□□□ 0.756e-7■■□□□ 12.2
LSM11P83369 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.726e-7■■□□□ 12.2
LSM11P83369 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.71■□□□□ 0.596e-7■■□□□ 12.2
LSM11P83369 GPATCH2L-205ENST00000554375 1791 ntTSL 516.84■□□□□ 0.296e-7■■□□□ 12.2
LSM11P83369 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.24■□□□□ 0.036e-7■■□□□ 12.2
LSM11P83369 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.04■□□□□ -06e-7■■□□□ 12.2
LSM11P83369 YJEFN3-202ENST00000458210 2785 ntTSL 214.85□□□□□ -0.036e-7■■□□□ 12.2
LSM11P83369 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.226e-7■■□□□ 12.2
LSM11P83369 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.386e-7■■□□□ 12.2
LSM11P83369 ROR2-205ENST00000495386 664 ntTSL 312.11□□□□□ -0.476e-7■■□□□ 12.2
LSM11P83369 ROR2-206ENST00000546883 501 ntTSL 311.5□□□□□ -0.576e-7■■□□□ 12.2
LSM11P83369 HERC1-205ENST00000559886 2462 ntTSL 1 (best)11.1□□□□□ -0.636e-7■■□□□ 12.2
LSM11P83369 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.656e-7■■□□□ 12.2
LSM11P83369 GCLC-208ENST00000513939 519 ntTSL 210.92□□□□□ -0.666e-7■■□□□ 12.2
LSM11P83369 HERC1-214ENST00000561400 2215 ntTSL 210.45□□□□□ -0.746e-7■■□□□ 12.2
LSM11P83369 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.916e-7■■□□□ 12.2
LSM11P83369 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.969e-13■■□□□ 12.2
LSM11P83369 GPATCH2L-210ENST00000556675 771 ntTSL 39.04□□□□□ -0.966e-7■■□□□ 12.2
LSM11P83369 GCLC-204ENST00000505197 592 ntTSL 48.76□□□□□ -1.016e-7■■□□□ 12.2
LSM11P83369 XRCC2-202ENST00000495707 4728 ntTSL 1 (best)8.51□□□□□ -1.056e-7■■□□□ 12.2
LSM11P83369 CAMTA1-212ENST00000486138 392 ntTSL 27.55□□□□□ -1.29e-7■■□□□ 12.2
LSM11P83369 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.244e-7■■□□□ 12.2
LSM11P83369 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.93□□□□□ -1.34e-7■■□□□ 12.2
LSM11P83369 GPATCH2L-208ENST00000556372 539 ntTSL 36.35□□□□□ -1.396e-7■■□□□ 12.2
LSM11P83369 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.68□□□□□ -1.56e-7■■□□□ 12.2
LSM11P83369 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.686e-7■■□□□ 12.2
LSM11P83369 PLXNB1-216ENST00000483753 424 ntTSL 210.2□□□□□ -0.787e-11■■□□□ 12.2
LSM11P83369 RPL23-205ENST00000470646 333 ntTSL 311.73□□□□□ -0.532e-78■■□□□ 12.2
LSM11P83369 RPL23-207ENST00000577407 615 ntTSL 2 BASIC10.69□□□□□ -0.72e-78■■□□□ 12.2
LSM11P83369 RPL23-202ENST00000378096 392 ntTSL 310.69□□□□□ -0.72e-78■■□□□ 12.2
LSM11P83369 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.72e-78■■□□□ 12.2
LSM11P83369 RPL23-208ENST00000577760 3081 nt10.42□□□□□ -0.742e-78■■□□□ 12.2
LSM11P83369 RPL23-204ENST00000394333 444 ntTSL 2 BASIC10.2□□□□□ -0.782e-78■■□□□ 12.2
LSM11P83369 RPL23-209ENST00000584056 549 ntTSL 29.96□□□□□ -0.822e-78■■□□□ 12.2
LSM11P83369 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.952e-78■■□□□ 12.2
LSM11P83369 RPL23-201ENST00000245857 588 ntTSL 3 BASIC8.98□□□□□ -0.972e-78■■□□□ 12.2
LSM11P83369 RPL23-211ENST00000584912 2779 ntTSL 1 (best)8.43□□□□□ -1.062e-78■■□□□ 12.2
LSM11P83369 NRDC-203ENST00000440943 1660 ntTSL 57.91□□□□□ -1.142e-7■■□□□ 12.2
Retrieved 100 of 11,495 protein–RNA pairs in 74 ms